Start R in an Administrator command window and run the following script:
# CHECK & AUTO INSTALL MISSING PACKAGES
packages <- c("pryr", "plyr", "abind", "maptools", "spdep", "RODBC", "RJDBC", "MatrixModels", "rJava", "here")
if (length(setdiff(packages, rownames(installed.packages()))) > 0) {
install.packages(setdiff(packages, rownames(installed.packages())))
}
if (!require(INLA)) {
install.packages("INLA", repos="https://www.math.ntnu.no/inla/R/stable")
}
--- Please select a CRAN mirror for use in this session ---
also installing the dependencies 'gtools', 'gdata', 'Rcpp', 'sp', 'LearnBayes', 'deldir', 'coda', 'gmodels', 'expm'
There are binary versions available but the source versions are later:
binary source needs_compilation
deldir 0.1-12 0.1-14 TRUE
spdep 0.6-12 0.6-13 TRUE
Do you want to install from sources the packages which need compilation?
y/n: if (!require(INLA)) {
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/gtools_3.5.0.zip'
Content type 'application/zip' length 144014 bytes (140 KB)
downloaded 140 KB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/gdata_2.17.0.zip'
Content type 'application/zip' length 1178306 bytes (1.1 MB)
downloaded 1.1 MB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/Rcpp_0.12.10.zip'
Content type 'application/zip' length 3261850 bytes (3.1 MB)
downloaded 3.1 MB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/sp_1.2-4.zip'
Content type 'application/zip' length 1528674 bytes (1.5 MB)
downloaded 1.5 MB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/LearnBayes_2.15.zip'
Content type 'application/zip' length 1129565 bytes (1.1 MB)
downloaded 1.1 MB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/deldir_0.1-12.zip'
Content type 'application/zip' length 171603 bytes (167 KB)
downloaded 167 KB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/coda_0.19-1.zip'
Content type 'application/zip' length 201300 bytes (196 KB)
downloaded 196 KB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/gmodels_2.16.2.zip'
Content type 'application/zip' length 73931 bytes (72 KB)
downloaded 72 KB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/expm_0.999-2.zip'
Content type 'application/zip' length 194188 bytes (189 KB)
downloaded 189 KB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/plyr_1.8.4.zip'
Content type 'application/zip' length 1121290 bytes (1.1 MB)
downloaded 1.1 MB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/abind_1.4-5.zip'
Content type 'application/zip' length 40002 bytes (39 KB)
downloaded 39 KB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/maptools_0.9-2.zip'
Content type 'application/zip' length 1818632 bytes (1.7 MB)
downloaded 1.7 MB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/spdep_0.6-12.zip'
Content type 'application/zip' length 3819364 bytes (3.6 MB)
downloaded 3.6 MB
trying URL 'https://cran.ma.imperial.ac.uk/bin/windows/contrib/3.2/RODBC_1.3-15.zip'
Content type 'application/zip' length 829585 bytes (810 KB)
downloaded 810 KB
package 'gtools' successfully unpacked and MD5 sums checked
package 'gdata' successfully unpacked and MD5 sums checked
package 'Rcpp' successfully unpacked and MD5 sums checked
package 'sp' successfully unpacked and MD5 sums checked
package 'LearnBayes' successfully unpacked and MD5 sums checked
package 'deldir' successfully unpacked and MD5 sums checked
package 'coda' successfully unpacked and MD5 sums checked
package 'gmodels' successfully unpacked and MD5 sums checked
package 'expm' successfully unpacked and MD5 sums checked
package 'plyr' successfully unpacked and MD5 sums checked
package 'abind' successfully unpacked and MD5 sums checked
package 'maptools' successfully unpacked and MD5 sums checked
package 'spdep' successfully unpacked and MD5 sums checked
package 'RODBC' successfully unpacked and MD5 sums checked
The downloaded binary packages are in
C:\Users\admin\AppData\Local\Temp\RtmpSkeuRW\downloaded_packages
> install.packages("INLA", repos="https://www.math.ntnu.no/inla/R/stable")
Warning: dependency 'MatrixModels' is not available
trying URL 'https://www.math.ntnu.no/inla/R/stable/bin/windows/contrib/3.2/INLA_0.0-1485844051.zip'
Content type 'application/zip' length 93004915 bytes (88.7 MB)
downloaded 88.7 MB
The downloaded binary packages are in
C:\Users\admin\AppData\Local\Temp\RtmpSkeuRW\downloaded_packages